sRNA contained within intergenic region

Length of intergenic region

Conserved in

E-value

Length of conserved region

Percent identity

sraA

188

Shigella_flexneri_2a

1.00E-102

187

100

sraA

188

Escherichia_coli_O157H7_EDL933

1.00E-102

187

100

sraA

188

Escherichia_coli_O157H7

1.00E-102

187

100

sraA

188

Escherichia_coli_CFT073

1.00E-102

187

100

sraA

188

Salmonella_typhimurium_LT2

1.00E-33

175

86

sraA

188

Salmonella_typhi

1.00E-33

175

86

sraA

188

Yersinia_pestis_KIM

0.003

29

93

sraA

188

Yersinia_pestis_CO92

0.003

29

93

sraA

188

Oceanobacillus_iheyensis

0.7

21

95

sraA

188

Methanosarcina_acetivorans

0.7

17

100

tpke11

89

Shigella_flexneri_2a

1.00E-43

88

100

tpke11

89

Escherichia_coli_O157H7_EDL933

1.00E-43

88

100

tpke11

89

Escherichia_coli_O157H7

1.00E-43

88

100

tpke11

89

Escherichia_coli_CFT073

8.00E-39

88

98

tpke11

89

Salmonella_typhimurium_LT2

8.00E-05

61

87

tpke11

89

Salmonella_typhi

8.00E-05

61

87

tp2

161

Escherichia_coli_O157H7_EDL933

3.00E-86

160

100

tp2

161

Escherichia_coli_O157H7

3.00E-86

160

100

tp2

161

Escherichia_coli_CFT073

3.00E-86

160

100

tp2

161

Shigella_flexneri_2a

2.00E-81

160

99

tp2

161

Salmonella_typhi

1.00E-29

133

88

tp2

161

Salmonella_typhimurium_LT2

3.00E-27

133

87

tp2

161

Thermoanaerobacter_tengcongensis

0.59

21

95

tp2

161

Streptococcus_agalactiae_2603

0.59

17

100

tpke70

492

Shigella_flexneri_2a

0

409

100

tpke70

492

Escherichia_coli_O157H7_EDL933

0

409

99

tpke70

492

Escherichia_coli_O157H7

0

409

99

tpke70

492

Escherichia_coli_CFT073

0

409

98

tpke70

492

Salmonella_typhimurium_LT2

8.00E-40

142

90

tpke70

492

Salmonella_typhi

3.00E-33

92

95

ryeE

273

Escherichia_coli_O157H7_EDL933

3.00E-93

172

100

ryeE

273

Escherichia_coli_O157H7

3.00E-93

172

100

ryeE

273

Escherichia_coli_CFT073

3.00E-93

172

100

ryeE

273

Shigella_flexneri_2a

3.00E-90

171

99

ryeE

273

Salmonella_typhimurium_LT2

4.00E-28

87

94

ryeE

273

Salmonella_typhi

4.00E-28

87

94

ryeE

273

Streptococcus_agalactiae_NEM316

0.27

18

100

ryeE

273

Streptococcus_agalactiae_2603

0.27

18

100

ryeE

273

Vibrio_cholerae

1

25

92

ryeE

273

Oceanobacillus_iheyensis

1

17

100

ryeE

273

Fusobacterium_nucleatum

1

17

100

ryeE

273

Bifidobacterium_longum

1

17

100

rybB

175

Shigella_flexneri_2a

1.00E-79

174

95

rybB

175

Escherichia_coli_O157H7_EDL933

2.00E-72

174

94

rybB

175

Escherichia_coli_O157H7

2.00E-72

174

94

rybB

175

Escherichia_coli_CFT073

6.00E-72

157

96

rybB

175

Salmonella_typhimurium_LT2

6.00E-38

99

95

rybB

175

Salmonella_typhi

6.00E-38

99

95

rybB

175

Yersinia_pestis_KIM

5.00E-11

50

92

rybB

175

Yersinia_pestis_CO92

5.00E-11

50

92

rybA

586

Escherichia_coli_O157H7

0

585

99

rybA

586

Escherichia_coli_O157H7_EDL933

0

585

99

rybA

586

Shigella_flexneri_2a

0

585

99

rybA

586

Escherichia_coli_CFT073

0

585

98

rybA

586

Salmonella_typhimurium_LT2

8.00E-65

288

87

rybA

586

Salmonella_typhi

2.00E-62

288

87

ryeC and ryeD

888

Escherichia_coli_O157H7

0

749

95

ryeC and ryeD

888

Escherichia_coli_CFT073

0

887

92

ryeC and ryeD

888

Escherichia_coli_O157H7_EDL933

0

749

94

ryeC and ryeD

888

Shigella_flexneri_2a

1.00E-108

206

99

ryeC and ryeD

888

Salmonella_typhimurium_LT2

2.00E-32

173

87

ryeC and ryeD

888

Salmonella_typhi

1.00E-27

173

86

ryeC and ryeD

888

Leptospira_interrogans

0.91

18

100

ryeC and ryeD

888

Lactococcus_lactis

0.91

18

100

ryeB

396

Escherichia_coli_O157H7_EDL933

0

395

98

ryeB

396

Escherichia_coli_O157H7

0

395

98

ryeB

396

Escherichia_coli_CFT073

0

394

97

ryeB

396

Shigella_flexneri_2a

1.00E-121

261

95

ryeB

396

Salmonella_typhimurium_LT2

2.00E-67

145

97

ryeB

396

Salmonella_typhi

8.00E-61

142

96

ryeB

396

Yersinia_pestis_KIM

9.00E-30

93

94

ryeB

396

Yersinia_pestis_CO92

9.00E-30

93

94

rygC

390

Escherichia_coli_CFT073

0

390

96

rygC

390

Shigella_flexneri_2a

1.00E-179

379

95

rygC

390

Escherichia_coli_O157H7

1.00E-179

379

95

rygC

390

Escherichia_coli_O157H7_EDL933

1.00E-177

379

94

rygC

390

Salmonella_typhimurium_LT2

3.00E-08

55

89

rygC

390

Salmonella_typhi

3.00E-08

55

89