SSSD
Database of pairs of structurally similar, sequence dissimilar proteins
All 126 daps files (gzipped tar file)
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Evaluation of PSI-BLAST Alignment Accuracy in Comparison to Structural Alignments
- Common Agreement: Number of positions whose pairwise alignments is agreed upon by PSI-BLAST and DALI.
- DAPS length:Length of alignment according to DALI.
- BLAST length: Length of alignment according to PSI-BLAST.
- Sensitivity: Percentage of correctly aligned
positions by PSI-BLAST out of the structural alignment (alignment accuracy).
- Specificity: Percentage of correctly aligned positions by PSI-BLAST out of the
sequence alignment.
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